FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129274152
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTCAT4634157235.847515750867196No Hit
CCAGGGCA4016784031.071826330757908No Hit
AATAATGG2875429622.24288116003267No Hit
GTGTCATC122005539.437735859214918No Hit
AATAATGA3230810.24991925686737437No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)