FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133291238
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCACGCT3974716529.819788304464545No Hit
TTACTCAG3225922724.20206120375294No Hit
AAGGGTGA2978776422.34787856047972No Hit
CGTTAATC2966443322.25535109817196No Hit
GCCACGCA2062780.15475735921966605No Hit
CGTTAATA1597920.11988184849779848No Hit
TTACTCAA1511150.11337204325463614No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)