FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95347956
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGCCATCCTGTGGG1797960.18856827932420492No Hit
TTCGGTCAGGGTATCG1484580.155701292642288No Hit
GAGCATTCAAGATGCG1362440.14289136937555325No Hit
GAAGTCTGTTGTATCG1356660.1422851686511245No Hit
AAGGAGCGTTTAGGAA1330970.1395908266769767No Hit
CAGCTGGAGTGAGCAC1154230.12105450902376974No Hit
ACCATCCAGGTACATA1106420.1160402431699742No Hit
GACCGACTCAGCACGC1089670.11428351961734763No Hit
GCGAGTCCAAGGGAGG981510.10293980502319316No Hit
TAGCATGGTTATCGAC961310.10082124885823457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)