FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94201277
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGCCATCCTGTGGG1777050.18864393950837843No Hit
TTCGGTCAGGGTATCG1465020.15552018472106277No Hit
GAGCATTCAAGATGCG1345910.1428759824561614No Hit
GAAGTCTGTTGTATCG1342900.14255645387907No Hit
AAGGAGCGTTTAGGAA1308230.1388760366804794No Hit
CAGCTGGAGTGAGCAC1121930.1190992347163192No Hit
ACCATCCAGGTACATA1100790.11685510377953794No Hit
GACCGACTCAGCACGC1087970.11549418804587969No Hit
GCGAGTCCAAGGGAGG970820.1030580509009448No Hit
ATTACCTCAATAGCGG947060.10053579209971855No Hit
TAGCATGGTTATCGAC945380.10035745056831873No Hit

[OK]Adapter Content

Adapter graph