FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125454463
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGGCCTCAGGAATA2561440.20417288781507917No Hit
CTTGAAGGTACAACGG2553490.20353919174641083No Hit
TCTCTGGCACACATGT2271620.18107127842873155No Hit
GAACGTTAGAACCCGA2244030.17887207408476175No Hit
TGATCAGGTAACCCAT2216440.1766728697407919No Hit
AAACTGCAGTGCTGAG2207600.17596823159651162No Hit
TTCGGTCAGATCGCCC2151100.17146460544811387No Hit
CTGTTCGTCTTTCGAT2081600.16592474673459803No Hit
CTAGGATCAAACTACC1987340.15841126353551885No Hit
TACATGGGTGCCCTAG1985270.15824626342707315No Hit
TGGCAATGTCAAATCC1965800.15669430588531552No Hit
AGATAGAAGACTCTTG1956980.15599126194498159No Hit
TGGCAATCATGATTGC1938430.1545126377847554No Hit
CTTCCAGTCTGAGTAC1847940.1472996620295605No Hit
GAAAGTAAGCCCATGC1735560.13834183005510134No Hit
TTTGGTTTCTCGTGAA1731400.13801023563426357No Hit
GCAGCTGTCCCTATTA1658960.1322360289406364No Hit
TGTAAGCGTGCTGTCG1656740.13205907230259317No Hit
GTGCCAGAGACTCTTG1649450.1314779849641539No Hit
ATTACCTCATTAGCCA1617010.1288921861631977No Hit
TGAATCGGTTTGGATC1589440.12669457602317424No Hit
TAGTCCCGTCCAAGTT1582450.12613740174392998No Hit
GCGATTACAAAGGTCG1564110.12467551672514035No Hit
GCGATCGTCTGTTGCC1543210.12300957360121974No Hit
GCTTAAGCAGCGTCGT1532730.12217421073333996No Hit
TAACGGTGTCTAACCA1520670.12121290575369965No Hit
CTGGCAGCATTTCTTG1520460.12119616661226314No Hit
GAATCTGAGAACCCGA1511640.12049312267192917No Hit
CTTAATCAGGAAGGTA1506930.12011768764256717No Hit
GCAAAGGCACAGATGG1503540.1198474700736633No Hit
AATGCCACAAGGACCA1499140.1194967452054695No Hit
TTCTAACAGACTAATG1454880.11596877187222904No Hit
GCGATCGCAAGTCCTA1361670.10853898438033249No Hit
GTGTCCTAGCGTCAAG1327550.10581927244788414No Hit
CCCTCTCGTGCAAGCA1282420.10222195124297809No Hit
GTCACGGCAGGTAACG1260610.10048347183949924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)