FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99968233
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACCTAC2705259327.061189528077385No Hit
ACGTTACA2413948824.147158827944875No Hit
GACGACGG2369441423.701943396358722No Hit
CGTAGGTT2367089823.67841992365715No Hit
GACGACGA1742530.174308372540705No Hit
CGTAGGTA1510340.15108199421710294No Hit
TTACCTAA1327840.13282619489733302No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)