FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006205994

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006205994
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99968233
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG10711681.0715083860690024No Hit
TACCACCACTCGAGAG2290990.22917180100602558No Hit
CAGGCTTCTGGATGGT2270450.22711714830450186No Hit
GAGGGATACGACCGAA1929560.1930173158107136No Hit
CCGTTACTGTAGGCGA1921380.1921990558740795No Hit
TCGCGGTGATGCTACA1718780.17193261783470756No Hit
ACTGGAGGAATTCGGT1658510.16590370262921422No Hit
CATTGGAACCGCAACC1584350.1584853460398765No Hit
TGTAAGCTGAGACTTC1559970.1560465713143094No Hit
GGTACCTCTCGATTGT1557600.15580949600259514No Hit
AAGACAAACACCGTTA1557300.15577948646946677No Hit
CGATACAACTAGACAA1504470.15049480768555748No Hit
ATTCCAACTTTTGTCT1504270.15047480133013855No Hit
TCACCCATGTAACGGG1471390.14718575649926713No Hit
ATTTCGACTCACCTAA1461070.14615342855965055No Hit
AGTGTTCGACGAGGAT1444210.1444668927978351No Hit
CGTGTACCTATCATGC1425170.14256228776195334No Hit
GCTAAGACTAAGTTAG1424460.14249126520021616No Hit
CGAAACGGAACTAGGG1418960.14194109042619568No Hit
TTGCATTACTTCCATT1411650.14120985813563394No Hit
CCGTTTGTGCAAGTTC1347130.13475580787748845No Hit
CGCACACGAATCAGGG1339690.1340115714559044No Hit
TCCGTGTTGGAATAGT1331860.13322832264125345No Hit
CGTGAATACGAGAGGG1323380.13238005317149099No Hit
TAACCAGACATCCTCC1292670.1293080772969149No Hit
TAGCTTTACAGCAGGT1285720.12861285644610723No Hit
GGTATTTCTGAATAAC1282950.12833576842355512No Hit
TTGCGATGACGAATCT1281920.12823273569314764No Hit
TTCTAGACTTTGGCGC1281060.12814670836484626No Hit
TTGGCGCGAATCATGC1276170.12765755297485354No Hit
CCGTCTATGGCCAGCT1259490.1259890229329151No Hit
TCCTTAATGCGTTCTC1255070.12554688247815685No Hit
CGTGCAGACTAACGAA1241650.1242044560295469No Hit
TCGACTAGACGAATCT1203890.12042725612645369No Hit
CATATCACTCGCACTG1191650.11920286717481542No Hit
TTCTAGTACAGTGAGC1178050.11784243500632845No Hit
TGGTCAAACAGTAGGC1140000.1140362258878778No Hit
ACAGTCATGTAAGTAG1139810.11401721985022982No Hit
CTCGGATCTTGGTCCG1134410.11347704825391883No Hit
TCGATGATGGCAGTTT1133570.11339302156115932No Hit
TTGTCAACTTAGCTTG1133410.11337701647682419No Hit
GGTATTGACGTTAGGG1125130.11254875336248066No Hit
ACCGGCTGATGCTCAA1114820.11151742574063502No Hit
CTGCTGGGACAAGTTC1111370.11117231610965855No Hit
TCAATGGACGAACATA1110490.1110842881458153No Hit
AGGCCAAGACTCTGGG1110430.1110782862391896No Hit
ACCCTTGTGAGTGGTG1107670.11080219853440841No Hit
GTTAGTTCTCTCGATA1104310.11046609176337047No Hit
CTGCCTTGACCTATCC1103680.11040307174380085No Hit
ACTTCCTCTGACATAA1103430.1103780637995272No Hit
GTTAAGAGATGGGCAA1089830.10901763163104024No Hit
ATAGGCGGACGTAGAG1088880.10892260144280033No Hit
ACCTATGGAGACAAAT1086740.10870853343981782No Hit
GCTGAATTGTGCACCG1081480.10818236629230008No Hit
GATAACCTGTGAGCAG1073090.10734309968247614No Hit
CCGCTAACTCTCATTT1067890.10682293444158407No Hit
TACGTGAACCTCCTAC1067210.10675491283315972No Hit
CTTGCGTTGAGACAAT1067150.10674891092653403No Hit
CTGACGTCTATGGCCC1064140.1064478152774792No Hit
GGGTATGGACGGCTCA1059010.10593465226098374No Hit
CGACCTTTGGCTTCGG1047900.10482329921746242No Hit
GCTTTGCACAGCTGAG1045550.10458822454129002No Hit
GCATATCGACGTAGAG1034380.10347086959114302No Hit
CCTATCGACCAATGAA1027040.10273663634726843No Hit
TGTACTGGACGTGCAC1026950.10272763348732991No Hit
TCCGAGTCTATCAGCT1020170.10204941803862833No Hit
TAAGCCAACAATCCGT1019630.10199540087899722No Hit
GCCATTCACCCTGAGC1018890.10192137736394721No Hit
CTGCGACGAGTACACT1018710.10190337164407018No Hit
TAGCAGACTGAACCTT1018690.10190137100852827No Hit
AGTTTCACTGCTCTTC1018570.10188936719527691No Hit
GGGTATGGACTCGATA1017830.1018153436802269No Hit
TCAGCCGGACGATGTT1015790.10161127885495386No Hit
CTGGTGGACGCGCACT1014320.10146423214262475No Hit
TACCTGCTGATCCGTA1014270.10145923055377001No Hit
TAGACCTGAGGCCAAA1009000.10093206308848131No Hit
ACGCAGAGAGAACGTG1008380.10087004338668265No Hit
AGTTTCACTGGATGGT1002510.10028285685513716No Hit
ATGATGCACCCAGAGA1000130.10004478122565194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)