FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55401900
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACCTAC1493473026.95707186937632No Hit
ACGTTACA1326792123.948494546215922No Hit
GACGACGG1318499523.798813759094905No Hit
CGTAGGTT1313154223.70233150848617No Hit
GACGACGA970460.17516727765654247No Hit
TTACCTAA830220.14985406637678492No Hit
CGTAGGTA827250.1493179836792601No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)