FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55837338
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACCTAC1506828926.986044714380903No Hit
ACGTTACA1338464423.97077740346433No Hit
GACGACGG1328948823.800360969930193No Hit
CGTAGGTT1323907723.71007908722296No Hit
GACGACGA972700.17420243063879587No Hit
CGTAGGTA842380.1508632091307791No Hit
TTACCTAA803600.1439180356341486No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)