FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105720400
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCCCAT2862837627.079330006318553No Hit
TGCGAATG2611128024.698430955615No Hit
CTTAGTCA2512418623.764747390286075No Hit
ACATTGGC2443463223.11250430380513No Hit
TGCGAATA2012460.19035682801048806No Hit
CTTAGTAA1333420.12612702940965034No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)