FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105113513
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCCCAT2847614627.090851772787765No Hit
TGCGAATG2592982924.668406810835066No Hit
CTTAGTCA2498634723.77082288173548No Hit
ACATTGGC2425500223.075056011114384No Hit
TGCGAATA1993710.18967209287353948No Hit
CTTAGTAA1340260.12750596585997465No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)