FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96849494
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG10304071.0639260541722604No Hit
TTCCCAGACCGATTCA2143450.22131762505646133No Hit
CTGAAGTACTCCGTAA1931590.1994424462351863No Hit
CGTGCCAGAAGAGGCT1772390.18300456995676198No Hit
ATTTAGCCTATAACCC1681060.1735744742249247No Hit
TCGCCGAGAACTCGAT1668310.17225799858076699No Hit
AGCAGAGACTAAGCAA1569090.16201323674442739No Hit
GTGAAGCGACCAGAGA1529070.1578810520166476No Hit
GTTGTGATGCCAGAGA1525120.15747320269943796No Hit
TGGAGTTACTCGTACA1455420.15027646917804238No Hit
TGGAATCACCCGGACT1318310.13611945148624113No Hit
CACTATTTGCCGGACT1310380.13530065526207086No Hit
TAGGGTTTGGGTGTCC1298950.13412047356695533No Hit
TCAAAGCACTTTCTTG1283590.13253450761446414No Hit
CCACTTGTGCTGTGCG1258910.12998622377934158No Hit
GCGTTAATGGTCGGTC1223140.12629286426628103No Hit
GTGCATTGAAGGTCCC1183510.12220094820526373No Hit
TCAGGCTCTGACTCGC1082430.11176413580436466No Hit
CAATCGCCTGTCTTGA1029680.10631754049226112No Hit
AGATACGCTGAGTAAT1014650.10476564802703048No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)