FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96404946
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG10159061.0537903314628692No Hit
TTCCCAGACCGATTCA2174310.22553925812063627No Hit
CTGAAGTACTCCGTAA1944170.20166703895047045No Hit
CGTGCCAGAAGAGGCT1792800.185965562389299No Hit
TCGCCGAGAACTCGAT1703900.17674404381700498No Hit
ATTTAGCCTATAACCC1683460.17462382064920196No Hit
AGCAGAGACTAAGCAA1580640.1639583927571517No Hit
GTGAAGCGACCAGAGA1538350.15957168836544963No Hit
GTTGTGATGCCAGAGA1537900.1595250102624403No Hit
TGGAGTTACTCGTACA1473750.15287078735566118No Hit
TGGAATCACCCGGACT1322310.13716204975624383No Hit
CACTATTTGCCGGACT1316840.13659465148188557No Hit
TAGGGTTTGGGTGTCC1301600.13501381972663518No Hit
TCAAAGCACTTTCTTG1299890.1348364429351996No Hit
CCACTTGTGCTGTGCG1264400.13115509654452792No Hit
GCGTTAATGGTCGGTC1224680.1270349759855682No Hit
GTGCATTGAAGGTCCC1188350.12326649713594569No Hit
TCAGGCTCTGACTCGC1091630.1132338168624668No Hit
CAATCGCCTGTCTTGA1031010.10694575774151671No Hit
AGATACGCTGAGTAAT1021570.10596655486949809No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)