FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45063544
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG4741471.0521742364515316No Hit
TTCCCAGACCGATTCA962870.21366939093827153No Hit
CTGAAGTACTCCGTAA880430.19537522392823786No Hit
CGTGCCAGAAGAGGCT802050.17798200691894095No Hit
TCGCCGAGAACTCGAT765970.1699755349912115No Hit
ATTTAGCCTATAACCC747120.1657925528449338No Hit
AGCAGAGACTAAGCAA720990.15999407414561093No Hit
GTTGTGATGCCAGAGA676180.15005033780743032No Hit
GTGAAGCGACCAGAGA674050.1495776719203443No Hit
TGGAGTTACTCGTACA648920.14400110208819794No Hit
TGGAATCACCCGGACT584140.1296258456725019No Hit
CACTATTTGCCGGACT580660.12885360281472757No Hit
TCAAAGCACTTTCTTG574450.1274755487495613No Hit
TAGGGTTTGGGTGTCC573860.1273446225179271No Hit
CCACTTGTGCTGTGCG556910.12358326721928484No Hit
GCGTTAATGGTCGGTC526370.11680617041571342No Hit
GTGCATTGAAGGTCCC515970.11449831819707744No Hit
TCAGGCTCTGACTCGC484100.10742608260016122No Hit
CAATCGCCTGTCTTGA470150.10433045390304856No Hit
AGATACGCTGAGTAAT466880.10360481190738127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)