FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45334139
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG4811411.0613215793069324No Hit
TTCCCAGACCGATTCA981300.21645938836513473No Hit
CTGAAGTACTCCGTAA889260.1961568080073165No Hit
CGTGCCAGAAGAGGCT811550.17901520088426076No Hit
TCGCCGAGAACTCGAT767670.16933596113957297No Hit
ATTTAGCCTATAACCC750010.16544044213567174No Hit
AGCAGAGACTAAGCAA728110.16060964563593014No Hit
GTGAAGCGACCAGAGA689530.15209950276104284No Hit
GTTGTGATGCCAGAGA685760.1512678998932791No Hit
TGGAGTTACTCGTACA656020.144707722363493No Hit
TGGAATCACCCGGACT597510.13180133408952577No Hit
CACTATTTGCCGGACT595010.13124987330188403No Hit
TAGGGTTTGGGTGTCC581480.12826536751916695No Hit
TCAAAGCACTTTCTTG579500.1278286105753547No Hit
CCACTTGTGCTGTGCG568210.12533821365836462No Hit
GCGTTAATGGTCGGTC534790.11796628584916986No Hit
GTGCATTGAAGGTCCC527320.11631852101569637No Hit
TCAGGCTCTGACTCGC489460.1079671988476499No Hit
CAATCGCCTGTCTTGA473040.10434520439441897No Hit
AGATACGCTGAGTAAT470430.103769479332121No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)