FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110674719
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGGAAT2977887126.906660589759433No Hit
ACACCGGG2727221124.641771170885015No Hit
TTGTTCTA2687194324.280109534319216No Hit
CATAATCC2452126422.15615654736833No Hit
ACACCGGA3494390.31573515899326565No Hit
CATAATCA3072520.27761714940518617No Hit
GGCGGACT2095360.1893259832898243No Hit
GTGTTCTA1523530.13765835718995592No Hit
TTGTTCAA1445370.13059622044308059No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)