FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95744179
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG8944410.9341988299884008No Hit
ACAGACTACAGCTTTG3927960.4102557503783076No Hit
AAAGACTGAACCTAGT2517110.2628995335580663No Hit
GTTGATGACGGCCATC2127710.22222865371272338No Hit
GCATAGTACTTAGAAG2056890.2148318593864594No Hit
TGTTGTACTGCGGTAA2047240.21382396521463723No Hit
CACACCACTCGTAGAG1849780.19320025711432545No Hit
GCCAGTCGACTTGTGA1681260.17559918707956126No Hit
CGCTTCAACTTCGCCT1414470.14773430769091456No Hit
AAGTGCTTGAAGACAT1412150.14749199530970963No Hit
ACCAATGACCGACACC1212180.12660613027973222No Hit
CCCTCCTTGGCGCACT1167560.12194579474121346No Hit
AGTCACAACTATGACC1144570.11954460437746299No Hit
TATGTACCTAGTACGG1144090.11949447078135163No Hit
CCAACACCTGTCCCAG1112640.11620967578613839No Hit
CACTTTATGCCGGACT1111850.11612716424253844No Hit
TCTACTAACGGAATTA1101000.11499393608043786No Hit
TTGCATTACTCTGTGA1052650.10994402072213706No Hit
ACGCTCTTGCCTTTGC1034880.10808803321609767No Hit
CCGTTTGTGAAAGGTT1027470.1073140958261285No Hit
AGTGAAATGTCCGTAA1025000.10705611669613879No Hit
TAGGGTTTGATCCTTT1020510.10658715868251374No Hit
TCTACTCCTCCCGAGT1012670.10576830994602816No Hit
GTTTCCCGAGCGGTAA1011560.10565237600502063No Hit
CATAGTCGAGACCGAA1000590.10450661444389221No Hit
TGCGCATCTCTCCTAC999860.10443036959980616No Hit
AAGCCTAACCATGCTA958080.10006665783827966No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)