FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95420539
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG8869040.9294686545419744No Hit
ACAGACTACAGCTTTG3950850.4140460786959084No Hit
AAAGACTGAACCTAGT2552250.26747386115687316No Hit
GTTGATGACGGCCATC2116970.22185684782183007No Hit
TGTTGTACTGCGGTAA2055560.2154211264725721No Hit
GCATAGTACTTAGAAG2029650.21270577815537176No Hit
CACACCACTCGTAGAG1861630.19509740979350368No Hit
GCCAGTCGACTTGTGA1679090.17596735646190387No Hit
AAGTGCTTGAAGACAT1418090.14861475473325508No Hit
CGCTTCAACTTCGCCT1412430.14802159103293264No Hit
ACCAATGACCGACACC1212490.12706803091942293No Hit
CCCTCCTTGGCGCACT1180650.12373122310700845No Hit
AGTCACAACTATGACC1152540.12078531646106086No Hit
TATGTACCTAGTACGG1147340.12024036041129468No Hit
CCAACACCTGTCCCAG1124670.1178645616327948No Hit
TCTACTAACGGAATTA1117400.11710267115552554No Hit
CACTTTATGCCGGACT1115080.11685953691793756No Hit
TTGCATTACTCTGTGA1060920.11118361006114208No Hit
ACGCTCTTGCCTTTGC1039560.10894509828748714No Hit
AGTGAAATGTCCGTAA1037600.10873969177642143No Hit
CCGTTTGTGAAAGGTT1036440.10861812465762742No Hit
TCTACTCCTCCCGAGT1028420.10777763475010343No Hit
TAGGGTTTGATCCTTT1027770.10770951524388267No Hit
CATAGTCGAGACCGAA1018590.10674745821756468No Hit
GTTTCCCGAGCGGTAA1017440.10662693909117409No Hit
TGCGCATCTCTCCTAC994420.10421446057855531No Hit
AAGCCTAACCATGCTA967070.10134820135526589No Hit
CGAGGACCTCGAACAG962420.10086088488768649No Hit
TCGGCTTACTCCGTAA958190.10041758410104977No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)