FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81184695
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG7323520.9020813590541912No Hit
AGGGCGTCTTGCATCA3888040.47891292810793956No Hit
TTCCAAACTACCAGTT2350400.28951269694367887No Hit
CTTCCTTTGTACAGCT2093510.25787003326181124No Hit
CCTATCGACGAGTGAC1991210.24526913601141198No Hit
TGGCATCCTCTATCTT1987560.24481954388077704No Hit
GGCTTACCTTACGTTG1888980.2326768610758469No Hit
GCCTCTTGAAGGCGTA1865060.2297304929211103No Hit
TCGCTGGGACGTGCAC1842240.22691961828519525No Hit
CAAACCTGATTGACCA1780360.21929749197185502No Hit
CTTACATTGAAAGCTA1705130.21003096704372665No Hit
CGCTAGTCTCCTAACA1697370.20907512185640412No Hit
CGTAGCGACAAGTTAG1685560.207620414167966No Hit
TCCGACACTTGTCACA1551020.19104832505683492No Hit
CCGCTATTGCGGAATG1540560.18975990486876868No Hit
CGACAATACCTTCACC1490830.18363436605877498No Hit
ATGATGCACGCATGAG1474940.18167710059143535No Hit
CCAAGTTGAGCGTATT1457690.1795523158644619No Hit
CTTCAGCACCAATAGA1448540.17842525613971943No Hit
AACAGCTACGAAGGTC1398510.17226276455186534No Hit
CCTTCTACTGCCACGT1386060.1707292242706584No Hit
CCTGAGGACTGTCACA1361720.16773112222691727No Hit
GGGTTCTCTTCATTTC1335010.16444109323807893No Hit
TAAGTGCACCAGACCC1315190.16199974638076794No Hit
AAATGCCTGAATCTGC1312600.16168072073190642No Hit
GGAATGGTGTGAAAGT1299850.16011022767283908No Hit
ACTAACCGATTCTCGC1285440.15833526257627745No Hit
TCCCACATGAAATCGA1284250.15818868322409785No Hit
GGCGTTTCTGTTGACT1264570.15576458099645507No Hit
AAGATCAGAAAGACAT1263420.1556229286813235No Hit
TACCACCACGCTAGAG1260580.15527310905091163No Hit
TGTTACTACGCGCACT1238090.15250288247064303No Hit
AGTCCTGCTCTCACGG1232600.15182664663579756No Hit
CAGATGACTCGACTAT1224570.15083754394840063No Hit
GTTGATGACCGAGTTT1216180.14980409792757118No Hit
TCCGAATGATGCACCG1193420.14700061384722823No Hit
AACGTAGCTAAGTTCC1172890.1444718120823143No Hit
CAATGCCCTCTTGTGA1171220.144266108285558No Hit
TTACCATTGGTGGTGA1170770.1442106791187674No Hit
TACTGTTTGTGCTCAA1168060.1438768723587617No Hit
TTCAAGCGATTGGGAG1158640.14271655513394488No Hit
CAATGCCCTATCCTCC1128850.13904714429240633No Hit
CCATTGCTGACACAAA1119630.1379114622528298No Hit
CGACGACACAACCAAA1112230.13699996039893975No Hit
CCCTATCGATCTATCT1102640.13581870326666867No Hit
CAGGCCATGACGCGAA1102300.1357768234517602No Hit
GGTTCACCTTGCGGCT1084500.133584291965376No Hit
CGTAATCGAGACTCGC1076920.1326506184447697No Hit
ACGATAGCTATCATGC1075700.13250034381480402No Hit
GTTTCAGGAGTTCTCC1067050.13143487205316223No Hit
AACCAACACACCTTGA1065150.13120083779337965No Hit
AGCCGGTACTTGTTTC1049920.12932486843733293No Hit
TTCCAAACTATTGCCA1048640.12916720325179518No Hit
ACGTTCAGACCATAAC1045800.1288173836213833No Hit
ATCCTCGACATTCTGG1030630.12694880482090867No Hit
GCTTTGCACTCCCAGG1016130.12516275389098894No Hit
TACTAACCTGAATTGA1000940.12329171157199027No Hit
CTTCCTTTGATAGGTA1000860.12328185749789415No Hit
ATTCAGGTGGCTTACA998510.12299239407132095No Hit
TGTTACTACGCTGAGA997990.12292834258969625No Hit
TCCGTAAGAGTCCCAG996860.12278915379308872No Hit
GTTCGCTTGTCTGGAT979820.12069023601061753No Hit
GTCGACCGAACCATGT973180.11987234786064048No Hit
CGATATTCTCGACATT972190.11975040369370113No Hit
AAACATGGAGTTTGGT970120.11949542952646433No Hit
CCTGCCTCTTGAACAA966320.11902736100689913No Hit
GTAACTCGATAAGTAG965630.1189423696178202No Hit
CAGCGCATGTGCGGCT956670.117838713319056No Hit
AGTGGTACTTGACTCA955220.11766010822606404No Hit
TCGCCTATGTCATGTG955220.11766010822606404No Hit
CAAGAATGAGCCCTAG954240.1175393958183867No Hit
AACGTCCCTTCTTTGT953370.11743223276259152No Hit
ATCGCAAACTGCGTGC951740.1172314560028833No Hit
ACCCGAGACTCGAGAG947300.11668455489054926No Hit
ACCCTTTCTTAGGAGC944920.11639139618619002No Hit
TATCCATACACCCGGT934180.11506848673878742No Hit
TGTTTGTTGAGGACCA933020.11492560266439383No Hit
TTCTTAGACCGAAAGC928230.11433558997788931No Hit
CCGTTCTGATAACGAA927010.11418531534792364No Hit
TAACGCATGTGATGAA926450.11411633682925089No Hit
GGGATTGGACGCTCGA922040.11357313099470288No Hit
GTCAAGTACACCTGCG920680.11340561173506904No Hit
TGACTCAGATACGATC917630.11302992516015488No Hit
AACAGCTACATGTCAC906240.11162695136072139No Hit
CCCAATGCTAGGTGAC905350.11151732478640218No Hit
TTCAGTTACGGTGCAA904260.11138306302684267No Hit
GCTAGCGACGCTGTTA896300.11040258265427984No Hit
TGGGTTTGATCTGGAT890400.10967584468969181No Hit
TAGCGCGACGGACTGA884650.108967583114034No Hit
TTCGAGAACTCGACAT884090.10889860459536123No Hit
CTTTCCGGACTATCTT874690.10774075088906844No Hit
GTAGATAGAACCATGT872940.10752519301821606No Hit
AGATATGGATCGTCCT867910.10690561810942321No Hit
GGCTCAGACCGATTAC863150.10631930070070474No Hit
CAATCGCCTATCACAC863000.10630082431177454No Hit
ATCGTTTACATCCTCC861530.10611975570025854No Hit
AAGCCTAACTCTATCT858290.10572066569936613No Hit
GCTACTGCTTTTCTGT856150.10545706921729521No Hit
CTTAGAGACCCTCAAA855310.10535360143928607No Hit
GGAAGAAGAAAAGGTT848580.10452462745595091No Hit
AAGAAACACCCTAGGC847360.10437435282598526No Hit
CAAACCTGATCGCTAA846100.10421915115897153No Hit
TGCTGCTACGGAATTA843900.10394816412132853No Hit
TCGACGGACTCGTAAC840190.10349118143512148No Hit
TCTACGAGAGTTCTCC838760.10331503986065355No Hit
CTATAGCGAGCGTATT836840.10307854208234692No Hit
CGTTGCACTTGGTGAG829500.10217443078402892No Hit
AGGCCAAGATGTGCTA828680.10207342652454382No Hit
GTCTGGCGAGATGGAC818880.10086630244777048No Hit
CAGTCCGGATCTGTGA818390.10080594624393181No Hit
CCTACTGTGAGGACCA816790.10060886476200964No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)