FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104252326
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG11114751.0661392821105977No Hit
AGAACGCGAAGGACAC4849580.4651771510594402No Hit
TGCACGGACACACCTA3438200.32979599898807055No Hit
TGGACCTCTATGTCCA3012140.28892784607990424No Hit
GCACAATTGCCACAAT2676510.25673384016391154No Hit
CGCTGAGTGAGATTCC2596800.24908796759124588No Hit
CAGGCTTCTTAGGTTC2448730.23488492717179277No Hit
TGGCCTTTGCGCAAAG2341560.22460506061035032No Hit
ATAGATGGAGGCAGTA2269010.21764598326563955No Hit
GTGTTGTGACTGTACA1906220.18284675969723688No Hit
TTGACAGTGTAATAGG1674910.16065924514720178No Hit
CTTGCTGACGAACCTT1607530.15419607999921267No Hit
AAGGCTTACCCCGAGT1378600.13223685771768776No Hit
TCCGTTGTGGTGAGCA1290950.12382937144251342No Hit
TGCGACGACCCCGCAA1272660.12207497413534926No Hit
ACACACTGATTACGAC1169090.11214042361030871No Hit
TCTTTCCACGTTCTCC1081680.10375595840422783No Hit
GGGTTGCTGCGGCTCA1047470.10047449684719743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)