FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103785399
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG11012021.0610374971916812No Hit
AGAACGCGAAGGACAC4828290.4652186190467891No Hit
TGCACGGACACACCTA3445800.3320120203035496No Hit
TGGACCTCTATGTCCA3015750.29057555581590044No Hit
GCACAATTGCCACAAT2661730.2564647846080931No Hit
CGCTGAGTGAGATTCC2608010.2512887193313194No Hit
CAGGCTTCTTAGGTTC2467970.23779549183021398No Hit
TGGCCTTTGCGCAAAG2358580.2272554735758158No Hit
ATAGATGGAGGCAGTA2284070.2200762363499706No Hit
GTGTTGTGACTGTACA1890950.18219807585843553No Hit
TTGACAGTGTAATAGG1672230.16112382050966534No Hit
CTTGCTGACGAACCTT1613610.15547562716408694No Hit
AAGGCTTACCCCGAGT1404820.1353581537996496No Hit
TCCGTTGTGGTGAGCA1306020.12583851028987228No Hit
TGCGACGACCCCGCAA1266420.12202294467259311No Hit
ACACACTGATTACGAC1174630.11317873335920789No Hit
TCTTTCCACGTTCTCC1086210.10465923053395979No Hit
GGGTTGCTGCGGCTCA1044290.10062012672900164No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)