FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100120538
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG10662621.0649782964610117No Hit
GGTCAAGGAGCCCTGA3188370.31845314295055027No Hit
TGTTTGTTGAGGTAAT2319260.2316467776072078No Hit
TTGGCAAACTAGCTTG2259140.2256420156272033No Hit
CACATATCTCCTCAAA1847050.18448262832946422No Hit
TGGATAGCTACTCGAT1608820.1606883095254642No Hit
CAAGGGATGCCTAGCG1583830.15819231814355614No Hit
CTTAGGCCTGGAGTCA1417540.14158333827570924No Hit
AAGAATGTGAGCCTAT1301920.13003525810059072No Hit
TGGACGCACCAGACCC1204380.12029300122218681No Hit
CGCTTCAACTGAGCAG1200280.1198834948329982No Hit
GTCAAGTACGCGGTAA1168580.11671731128732048No Hit
GAAGCACGAACCATGT1123310.11219576147303563No Hit
GGTATCTGACAATGAA1099850.1098525858900199No Hit
CTGGCCAGAGCCGTTG1077970.10766722008625244No Hit
GTCCTACACCAGATTC1072720.10714285214887678No Hit
ATAGAACGAGTTTGGT1052150.10508832863043545No Hit
CGCCCTTCTCTCGATA1049260.10479967656586103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)