FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99556427
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG10543601.0590576939849399No Hit
GGTCAAGGAGCCCTGA3174630.3188774542903192No Hit
TGTTTGTTGAGGTAAT2343000.2353439220955569No Hit
TTGGCAAACTAGCTTG2275260.22853974058349844No Hit
CACATATCTCCTCAAA1860610.1868899935510944No Hit
TGGATAGCTACTCGAT1632440.1639713325589718No Hit
CAAGGGATGCCTAGCG1600950.16080830221036357No Hit
CTTAGGCCTGGAGTCA1410560.14168447407217616No Hit
AAGAATGTGAGCCTAT1302550.13083535028833448No Hit
CGCTTCAACTGAGCAG1202250.12076066168987763No Hit
TGGACGCACCAGACCC1198970.12043120028805374No Hit
GTCAAGTACGCGGTAA1159290.11644552089037907No Hit
GAAGCACGAACCATGT1121010.11260046526177561No Hit
GGTATCTGACAATGAA1105130.11100538993831106No Hit
CTGGCCAGAGCCGTTG1077340.10821400812224811No Hit
CGCCCTTCTCTCGATA1050140.10548188918029369No Hit
ATAGAACGAGTTTGGT1048120.10527898917063384No Hit
GTCCTACACCAGATTC1043290.10479383716733828No Hit
TGAGGTACTTCCCGTT1002320.10067858301101947No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)