FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86813830
Sequences flagged as poor quality0
Sequence length8
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAAGAC3021412334.80335218478438No Hit
GGATGAGT2799906832.25185203786079No Hit
AATCTTTG2639393030.402909306040293No Hit
TCGGCCCA8221560.9470334392573165No Hit
AATCTTTA1962450.2260526922956861No Hit
GGAGGAGT1924870.22172388892414954No Hit
CTCAAGAA1184960.136494381137199No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)