FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86233833
Sequences flagged as poor quality0
Sequence length8
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAAGAC2997837534.76405252680813No Hit
GGATGAGT2782693632.26916284702316No Hit
AATCTTTG2618138530.360919941944363No Hit
TCGGCCCA8163370.9466551254888554No Hit
GGAGGAGT1952220.22638678255204078No Hit
AATCTTTA1949150.22603077379153494No Hit
CTCAAGAA1190910.13810240813486743No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)