FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86233833
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG9576241.1104968510445314No Hit
AATCCAGACCCTTTGC1423110.16502919451579984No Hit
TCCCTGTGACCATGTA1085250.12584967665765245No Hit
TAGGCCTCTTTGGTTG994870.11536887151937221No Hit
TCCTGTGACCTGTACA897240.10404732908022307No Hit
TTCGCCAACCGAACGA882280.1023125111462922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)