FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32998127
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3638581.1026625844551723No Hit
AATCCAGACCCTTTGC538100.16306986151062453No Hit
TCCCTGTGACCATGTA408450.12377975271141906No Hit
TAGGCCTCTTTGGTTG358740.1087152613237715No Hit
TCCTGTGACCTGTACA336790.10206336862695269No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)