FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33181096
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3705061.1166177271540396No Hit
AATCCAGACCCTTTGC540660.16294217647301343No Hit
TCCCTGTGACCATGTA404830.12200621703394005No Hit
TAGGCCTCTTTGGTTG364020.10970704524045861No Hit
TCCTGTGACCTGTACA337670.1017657765132291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)