FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83843583
Sequences flagged as poor quality0
Sequence length10
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAGAGCCG8247329498.36566025571689No Hit
GACAGTGCCG3484940.41564779024293363No Hit
NACAGAGCCG993250.11846464147411256No Hit
GACCGAGCCG981830.11710258136272635No Hit
GACAGAGCCC893260.10653886296820116No Hit
GACAGAGCAG850860.1014818271781157No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)