FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99205552
Sequences flagged as poor quality0
Sequence length10
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAACACAA9802103098.8059922291446No Hit
ATAAACACAA2163870.2181198487762056No Hit
AGAAACAAAA1183530.1193007826820015No Hit
NGAAACACAA1098350.11071456968456765No Hit
AGAAAAACAA1035700.10439939893686595No Hit
AGAAACACAG1006960.10150238365691469No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)