FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126092794
Sequences flagged as poor quality0
Sequence length10
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTCGAGCT12401698398.3537433550723No Hit
ACCTCGAGCA4081380.3236806696503212No Hit
AACTCGAGCT3724910.2954102198734687No Hit
CCCTCGAGCT3305420.2621418635548674No Hit
ACCTAGAGCT2319390.18394310463134No Hit
ACATCGAGCT1504560.1193216481506469No Hit
ACCTCGAGAT1275780.10117786746798553No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)