FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127352561
Sequences flagged as poor quality0
Sequence length10
%GC59

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTCGAGCT12540154598.4680198146938No Hit
ACCTCGAGCA4183910.328529710525413No Hit
AACTCGAGCT3562220.2797132599477132No Hit
CCCTCGAGCT2649240.20802408520076798No Hit
ACCTAGAGCT2029900.15939216173281354No Hit
ACATCGAGCT1328500.10431670863689972No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)