FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66659894
Sequences flagged as poor quality0
Sequence length10
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGAGCCTTT6564471298.47707228577352No Hit
TAGTGCCTTT1367140.20509183527954605No Hit
TAGAGACTTT1070820.1606393193484526No Hit
TAGAGCCTTG1064220.15964921876413424No Hit
TATAGCCTTT753840.11308748855796259No Hit
NAGAGCCTTT736140.1104322188091088No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)