FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107403989
Sequences flagged as poor quality0
Sequence length10
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCAGTCTAA10597482698.66935761575857No Hit
ATAAGTCTAA1819980.16945180685979921No Hit
CTCAGTCTAA1779140.16564934101283704No Hit
ATCAGTATAA1372790.12781555068685577No Hit
NTCAGTCTAA1336880.12447209944874581No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)