FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98061996
Sequences flagged as poor quality0
Sequence length10
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAACATGCG9682514098.7386999546695No Hit
GTAACATGCA2881690.29386409797328616No Hit
GTAAAATGCG1447350.14759540484980543No Hit
GTAACAAGCG1281750.13070812876376697No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)