FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94125332
Sequences flagged as poor quality0
Sequence length10
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGACATGC9303499398.84160939798863No Hit
CGTGACATGA4264040.45301726000817716No Hit
CGAGACATGC952210.10116405220222754No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)