FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112385551
Sequences flagged as poor quality0
Sequence length10
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAAGGGT11083568498.62093749044305No Hit
TCCCAAGGGA3421990.3044866506015529No Hit
TACCAAGGGT2042420.18173332619955745No Hit
TCCAAAGGGT1412140.12565138377975296No Hit
TCCCACGGGT1249990.11122337247783746No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)