FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63058616
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCACTTACCGACTAT3992250.6331014305800812No Hit
TAGCGCGACCAAGTAA3663860.5810244868044678No Hit
CCTACGTACAGTCGGA2075830.32919054233603856No Hit
ATTCCAGGAACCGTTA2056180.32607439402095345No Hit
ATCGGGCACGATCATC2037660.32313744405681216No Hit
AGTGGTACTATGGCCC1997560.3167782813374781No Hit
TAGTCCGCTTCTTTGT1969060.3122586769110188No Hit
GGGTGAAACCATGCGC1962810.3112675355894268No Hit
GGGGGGGGGGGGGGGG1934830.30683039412092394No Hit
CGGTCGATGGCACGCT1863320.29549015157579733No Hit
TTCCTAAACCAGGTGA1794770.2846193135605767No Hit
TGGCGTTCTACCATGT1782260.28263544509127825No Hit
CTAATCACTCGAGTTT1659870.26322651927533586No Hit
CTATCTATGTAGGCGA1659850.26322334762310673No Hit
AATGGCTACAGCCATT1614960.2561045741949046No Hit
CCCTTGCCTCCAGGCT1412900.22406137172436513No Hit
GCAGTCGACGAACAGC1336950.21201702238437967No Hit
TCGACTCACGCCGTTG1300210.20619069723953345No Hit
TCGTGAATGGCGGTTC1276050.20235934134678757No Hit
CTCTTTCTGTGTGGGA1187460.18831050779801448No Hit
CCAACTCACGCACGCT1170120.18556068531538972No Hit
TTATCGACTACCATGT1129820.1791698060737648No Hit
ACCGGCTGATCGACAT1057130.16764243604712162No Hit
CCCAGGATGAAGGTGC1056180.16749178256623964No Hit
CTCGGTTACAGACTTC1039670.1648735836511223No Hit
CTCGGTTTGAGACTTC1016650.1612230119354348No Hit
TTAGCCAGACCACAAT1012650.16058868148961594No Hit
GTCGAATACCATCTTT1011350.1603825240947248No Hit
ACGAGGCCTGCCGCTA1006120.15955313703681667No Hit
GGTTCAATGTCCCGTT972230.1541787723346164No Hit
CCAGCTTTGGTTCTCC967570.15343977736523745No Hit
CGTGTCTTGCGTTCTC965820.15316225779519171No Hit
CTATAGCGATAACTCG960280.1522837101277326No Hit
AGCTCTGCTGAAATCA935420.1483413464069684No Hit
TAAGCTGTGTCGCAGC912660.1447320061702591No Hit
AAGTGGCGAATGAATG907830.14396605215693284No Hit
AGTGACACTGCTAGAG907720.14394860806967283No Hit
AACACTGACGAACAGC904310.14340784136461224No Hit
TGCTTGCACGACGCCT902610.14313825092513924No Hit
TTGCAGATGCCTACGG898330.14245951734811305No Hit
CAACGAACTCTGGGTC886450.14057555592403106No Hit
CTTCCACGACAGTCCG881970.13986510582471395No Hit
GAAGCCCTGCAATAGA881310.13976044130115384No Hit
CCCTATCGAGGTAGAC873770.1385647284107853No Hit
CTGGTGGACTAACGAA862840.13683142046758526No Hit
TCGTGAATGAGCCATT860790.1365063261141031No Hit
CAAGGGATGCGAAAGC855370.13564680836001855No Hit
TAGCATTCTGCGCTGT849940.13478570477981947No Hit
GCGCGAACTTTACGAC846510.13424176642252977No Hit
GTCACCTACTTGACAC842340.13358047693276365No Hit
TTGCGTCACTCGTAGT814860.1292226267699881No Hit
CAACAACACCAAGTTC812670.12887533085090228No Hit
TGGCAATTGGTTCTCC810770.12857402388913833No Hit
AAAGGATACAGCCATT803120.12736086691150977No Hit
TAACCAGACCCACAAT794680.12602242967083196No Hit
AGAGGGACTGCGAGTA793320.12580675731925356No Hit
CCTGCTATGGGTTTGT790770.12540237166004403No Hit
TGTTGTACTACGAGCA771540.1223528280417699No Hit
TTTACCATGTACGATC764930.12130459698005425No Hit
CACTATACTGTTTACG761020.12068453896926631No Hit
TGCTGCTACGCACCCA759420.12043080679093876No Hit
GCTACTGCTTCCCGTT757050.1200549660017911No Hit
TCTACGCACGAAGGTC755980.11988528260753456No Hit
TAGAACCACGAAGGCT755490.11980757712792174No Hit
ATGCAAAGACGACTAT749350.1188338798935898No Hit
CGTACAAACAGCTTGT748150.11864358075984414No Hit
CCCATGTACTCTGCAA741480.1175858347414412No Hit
CAATCGCCTCCTTCCA730430.11583349688486662No Hit
AAACACGCTCACTCAA729570.11569711583901555No Hit
TACCACCACGACTCGC725740.11508974443714401No Hit
GGTATTTCTTATCTGG724250.1148534563460765No Hit
CCTCTTGGATAACGAA724200.11484552721550374No Hit
AAACAACGACGACATT723560.11474403434417273No Hit
CCTCCCTTGGAAACAT722600.1145917950371762No Hit
AGTCCCACTCAATGAA722480.11457276512380164No Hit
ACAGCCGACTCATGCA721030.1143428203371923No Hit
GCTACGGACCAAGTTC720400.11424291329197582No Hit
CTACCTGTGCCTAGTA716360.1136022395416988No Hit
ACCGTTGCTTCTGGAT714860.11336436562451672No Hit
GGTGCGTTGAGGGCTA714630.11332789162388213No Hit
TCGGGTTCTTCAATGC708170.11230344795388468No Hit
ATAAGACGACTTCACC707970.11227173143159375No Hit
ATACATCCTCCTAGGC707910.11226221647490646No Hit
CGATCAAACAGCAATA707560.11220671256089731No Hit
CTCTCTTTGTTGACCA707010.11211949212459721No Hit
CCAACGGTGGCTCCTT705230.11183721507620782No Hit
TGCTTCTCTCCTGCGA704400.11170559150870041No Hit
CCATGATGATGCGTGC703980.11163898681188943No Hit
CGTGGAAGAGCCCAAC701490.11124411610936719No Hit
CACATATCTAGCAAGC699410.11091426427754139No Hit
CAAACCTGAGCCCTTT698380.11075092418774304No Hit
CAGAGTACTTTTCTTG698080.11070334940430661No Hit
CATGGATTGCTGCCAG698050.11069859192596299No Hit
TCCTGTGACAACGTGG697810.11066053209921385No Hit
AACAGCTACTTACGCA691600.10967573408208006No Hit
GTGATAAGACGGTTGC687660.1090509185929485No Hit
CCGACAGTGGCGCACT686660.1088923359814938No Hit
CTCTGACTGGAACCTT685420.10869569354328994No Hit
TGCCATCTGACCTAGT682920.10829923701465316No Hit
GAGTTACTGTGACCTA681040.1080011017051183No Hit
ACAAGACCTAGTCGGA680070.10784727657200723No Hit
AATTCTGCTAATCGAA678330.10757134282807602No Hit
CAGACTCCTCCGTTAA676290.1072478343007084No Hit
GTTACCCTGGAACCTT675150.10706705012365003No Hit
TCCGTTGACTACAGAA675110.10706070681919183No Hit
CTCTGGACTGCCCTGA674310.10693384073002807No Hit
TACCCGGGAGCTCTTC673980.10688150846824801No Hit
TGAACTGTGTGGTCCG672620.1066658361166696No Hit
AGAGAATACTAGACAA670450.10632171184981289No Hit
CAACAACACCAGGGAT670180.1062788945447201No Hit
GCTGAATTGCATGCTA668150.10595697184346703No Hit
CCTGAGGACCGAGGTA659700.10461694877667471No Hit
GTTTCCCGAAGCTTTG659590.10459950468941469No Hit
CGCATCGGAACGAGCA649010.10292170066022381No Hit
GGTACTCCTGCCCAAC646740.1025617181322216No Hit
TACCACCTGTTGACAC646630.1025442740449616No Hit
TCTTGAACTCGAGGTA645700.10239679221630872No Hit
TGTTCCTCTGCCAGCT644740.10224455290931218No Hit
CTCTGCAACTTGTGAC644280.10217160490804303No Hit
ATCTTACTGTATCTGG644260.10216843325581391No Hit
GTACTGAACTCGAGAG642590.10190360029468455No Hit
CGATATTCTACAGGCA641100.10166731220361702No Hit
TAGTTGCGAATAGCAA640830.10162449489852425No Hit
AAGACAAACCCCGAGT639300.10138186350299855No Hit
CCTACGGGATGGCTTA634660.10064604018584866No Hit
CACATATCTCAGTCTA633620.10048111426993578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)