FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences297996107
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGAGTT9698458032.5455862415008No Hit
CGACGTCA9372136631.45053368096517No Hit
ATGTCCAG8469033928.41994811697322No Hit
GCTATAGC186398486.255064264983838No Hit
TACGAGTA5381850.18060135262102603No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)