FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59963472
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTTGCACAGCAAGC2122310.35393380823578724No Hit
GGGGGGGGGGGGGGGG1864100.31087259256768857No Hit
CCGATTCACAATCCGT1781700.29713089328783365No Hit
TAGAGAAACGATCCAT1767890.2948278245128968No Hit
CAAGGGTGATGGGCAA1758170.2932068376560984No Hit
AGGTTACTGTTCTGGA1565830.26113064300212635No Hit
TTCCCATCTCTAACGT1559770.2601200277395545No Hit
CCCATTTCTGCGGTAA1448710.24159875198687628No Hit
CTGGTGGTGGGGTTCC1439540.240069487637407No Hit
TTGTTTGACACCTGCG1437450.2397209421095563No Hit
AGCCGGTACCTCGAGC1418300.2365273311725512No Hit
CTACATTACTTCTCGC1414920.2359636546729649No Hit
CTCTTTCTGTAACGAA1401590.2337406346316971No Hit
GTCCGAGTGTGATGAA1362570.2272333396571833No Hit
TTCAAGTCTGTACACT1337730.22309081768980957No Hit
AACACTCGACCACAAT1320420.22020406023186917No Hit
ACTGATTCTGGCATTT1316680.21958034718203107No Hit
AGGAGGTTGAGGCATG1261890.21044311777009844No Hit
CTGGTGGTGTTCCATT1252970.2089555454694151No Hit
ATATGCCGAGTGAGCA1237920.20644568413249986No Hit
AAACGAAACTAAGCAA1177860.196429586332159No Hit
GTACCCTTGGGCCAAA1169140.19497536767050447No Hit
GGTCTAAACGCTACGC1167410.19468685869290558No Hit
GAATCAGCTGTTGTCA1163910.19410317000990204No Hit
TGGTAAGCTCTGCGGT1146150.19114136686414687No Hit
CCTCCCTTGCCTCGTT1145890.1910980071334095No Hit
ACCTCGTTGAATACAG1134740.18923854175755533No Hit
ACAGCGGCTCGTTATG1130280.18849475560721368No Hit
TAATAGGGACGCAACC1113370.18567470542733083No Hit
GGGCTTCGAGTCCCAG1082540.1805332419710453No Hit
TGGCGTTCTGCTTTGA1074860.17925246223234037No Hit
GTCTACCACTCATGCA1051860.17541679374403135No Hit
CTGCTTTCTCCATGTA1048440.17484644651663933No Hit
CAGATTTCTAGGGCTA1045040.17427943465315016No Hit
CGCGATCGATTTGGGT1036950.17293027995443627No Hit
GGATGCCTGCCTTCCA1026400.17117087549566842No Hit
CGACGACACACGAGCA1015210.16930473939200852No Hit
CAGTGTAACAGCGCTC1004760.16756201175275506No Hit
CACTTAGGAGAGCCTC1003910.1674202587868828No Hit
AGTCGAACTAGTCTAC1001670.16704669802976052No Hit
TCAGTCCTGGCACCCA994340.16582428715935596No Hit
AAACGCTACGCTCAGC983030.1639381388722788No Hit
TCTCTCTACGTACTAC981810.16373468167420324No Hit
CTAGGGCACTAATCGC980200.16346618488002163No Hit
CTTTATGTGGAGTAAT975070.16261066403893357No Hit
GGCCTTTACAGTCTAC971800.1620653320408131No Hit
TGAGCGCACACCGTTA970080.16177849074516565No Hit
TCTACGCTGCGATTGT947300.1579795112597883No Hit
ATGCAAAGATGCAAGG941850.1570706245962542No Hit
ACCTCGTTGAACTAGA936780.1562251098468748No Hit
TCTCTCGGAATCTGTG932820.15556470779410506No Hit
TTCCACTCTACTCGAT920500.15351012362993258No Hit
TTGTAACCTCGATTAC918180.15312322141719878No Hit
TCAGCCGGACAGGCCT914560.152519520550778No Hit
ACCTATGGAGACCGAA910150.15178407281019352No Hit
GCTAGATACGGTATGG905340.15098191779155148No Hit
CGTTGCTTGAATGCGG899500.1500079915319113No Hit
ATCTGTACTCGTAACT888540.14818021211313448No Hit
AGGACAGACACCATGT885920.14774327944185753No Hit
ATTACCTACAACGTAA883620.14735971259302663No Hit
GCAACTTGATGATCAC880700.14687274946320653No Hit
GTGCAGAGAAACGCAG880440.14682938973246912No Hit
TCTCTCTACTGCATCA875670.14603390544163286No Hit
TAGCGTAACTGGTCCG870470.14516671082688476No Hit
TACCACCTGAACTAGA866350.14447962586289198No Hit
CGCGATCGAGTTAGAA860750.1435457239700863No Hit
TCCGAATGAACTCGAT852850.14222825522844973No Hit
TTACCATTGGCTCCTT843670.14069732319702902No Hit
GGAATGGTGGTTCTCC840480.14016533265452008No Hit
AAACGAAACTGCCACG839940.1400752778291424No Hit
CCCTTGCCTCGAGGTA839550.14001023823303627No Hit
TGGATCCCTTGAGCAG832490.13883285477532056No Hit
TCAGCGCGAAGCCATT824150.13744200802782067No Hit
GTGAGATCTTTTGGGT821790.13704843508728115No Hit
CAGTATTCTCTTAGTG821260.13696004794385488No Hit
TACTAACCTGGTTTGT819070.1365948255964898No Hit
CGAAATAGATCATTTC812570.13551083232805464No Hit
CCTACTGTGCCGCAGT811060.13525901235338741No Hit
TCCTGTTCTCTTGTGA807830.1347203510830727No Hit
CTACCTGTGTGCTGTA804450.13415667458348643No Hit
TTATCGACTAGCCCTG803320.13396822652297385No Hit
CTTCTAAACTACTTTC796410.13281585829452972No Hit
GTAAACAGACCGCAGT793580.13234390430227255No Hit
CCAAGTTGATCCTACC784940.13090302709622953No Hit
TCCGGGTGAAACGTAA782550.1305044511098357No Hit
GCGTGCTGAGCTGAGA781980.13040939323860365No Hit
GTGGCTGTGTGGCATT781520.13033267986883748No Hit
CGTCTTGACTGTGGGA767070.12792287944900857No Hit
CGAAATAGACATGCTA764120.12743091327333414No Hit
ATGCAACTGCGCCACA758190.12644197787613098No Hit
CTACTTTGATCTGTGA755810.12604506957168857No Hit
AGCCGGTACGCCCTTT755650.12601838666046555No Hit
CAATCGCCTACCCGGT746490.1244907899929477No Hit
GTCATATCTTTACGAC745550.12433402788951248No Hit
ATCAATCCTATCACAC741850.12371698556748013No Hit
CACCGTTACAGGTGAC738550.12316665052350538No Hit
GCACTTCTGTGTGCTA736440.12281476963175181No Hit
TAGGATAGACGAATCT735930.12272971785222844No Hit
ATTTCTGACCCGTGAC734900.12255794661123025No Hit
GCTGACCGAGCTGAGA732320.12212768466775907No Hit
CCCGGAAACAAGACAT728120.12142725824815483No Hit
AGCGCTCGAAAATCGA724540.12083022810953975No Hit
TCCGTAAGAGCACGCT723850.12071515805489048No Hit
GCATGATACGCAGGAT719420.11997637495040313No Hit
AGGCGATGATTCGCAA717100.11958947273766937No Hit
GTCATATCTAGTCTGT717050.11958113432791216No Hit
TCTACGCACTTTGTCT716400.11947273500106864No Hit
GAAGGACACGTTTACG712990.11890405545562806No Hit
GGTTCACCTGTCCCAG710090.11842042768971082No Hit
GGGAACCCTGCACTTA706630.11784340973451303No Hit
CGCACTTACACCAGTT704700.11752154711788536No Hit
GTACCGGACGAAATCA702670.1171830076817433No Hit
TTCACGCTGCGTACAT702220.11710796199392856No Hit
CATGCAAACTCAGGTT700960.1168978340680473No Hit
TGGTCCTTGGCTTACA697400.11630413929333511No Hit
CAGGCTTCTACTCGAT696450.11614570950794843No Hit
TTTCTCGCTCCCGCAA696140.11609401136745384No Hit
AAATGCCTGTTGACAC695900.11605398700061931No Hit
CATTCTATGTACCAAC689820.11504003637414457No Hit
AAGTGGCGAACTCGAT689000.11490328645412659No Hit
ACGGCTTCTAGGACCA687970.11473151521312842No Hit
GTCTAATCTCGACAAG686850.11454473483456729No Hit
GAGGTCCTGGTTTACG680410.11347074765784076No Hit
CCAGGACTGCGATTCA673220.11227168433475634No Hit
AATCTGCGAGACTGTT671910.11205321799911787No Hit
TCCGAGCGATGAACAA671150.11192647417080852No Hit
GGGTTGCTGTCAGGTT670510.11181974252591645No Hit
GTTCCTGTGGTTCTCC667060.11124439225267009No Hit
AACGTCCCTGAACCTT664370.11079578580773308No Hit
TGTCATGGATCTGGGC664300.110784112034073No Hit
CCTGTTGACAACGTAA661960.11039387445743636No Hit
TGCCAAATGAACTAGA658350.109791841272967No Hit
AACAGCTACCCAGCTG654440.10913977762995444No Hit
TCTTCAAACGACTGTT651460.1086428084084257No Hit
TCGACTAGAGCTACGC647750.10802409840444196No Hit
GCTATGATGATCAGGG647030.10790402530393838No Hit
TCGTATGGAACGTAAA646760.10785899789124953No Hit
CCCACCTCTCTGGGTC645300.10761551632633949No Hit
ATCGCCGGACGTTATG641910.10705017214480177No Hit
AGCTCTGCTACACCGC641530.10698680023064708No Hit
CAAACCATGGATAGCG641310.10695011122771544No Hit
GCGTGCTGACTGAGAG640560.10682503508135752No Hit
AGCGCAAGAGAATTGA639100.10658155351644746No Hit
TAGTGCTGAGCAGGAT636260.10610793184223889No Hit
TGGGTTTGACAGACCC634280.10577773081585404No Hit
AAAGCCTTGACCAGTT632530.10548588647435225No Hit
TTACACACTTACCTGA631120.10525074331919941No Hit
TCAAGCAACCTGCCAG630050.10507230135039546No Hit
ATCGAGTTGTATTGCG629290.1049455575220861No Hit
ATTACCTACCCTTCCA627880.10471041436693326No Hit
CAAGGCCACATTGCCA627670.10467539304595305No Hit
AAGCGCCACGGTTGAG626280.10444358525470306No Hit
GGTTTAGTGCCTTTGC625630.10433518592785954No Hit
TCAGGAGGACGCCACA625310.10428182010541352No Hit
TGTTTGTTGAACGTGG620630.10350134495214018No Hit
TACCGACCTCAAGGTG620150.10342129621847113No Hit
ATGGCTATGGTTAGAA618950.1032211743842985No Hit
CACTCTGACAGTACGG616270.10277423562131292No Hit
CAAGAATGAGGCCTGT614810.10253075405640287No Hit
TCCATTTGACTCATTT613740.10235231208759893No Hit
CGAAATAGATTCGCAA613320.10228226944563851No Hit
GGACTTAACAGCCTAT612810.10219721766611513No Hit
CAAGATAGAGGACTGA611960.10205546470024283No Hit
GGGATCAGAACCATGT609430.10163354116652885No Hit
ATAGGCGGATGGCATT609120.10158184302603425No Hit
TCAAAGGCTGCCCTGA609020.10156516620651987No Hit
CTTCCACGAGGAGTCA608670.1015067973382195No Hit
CTACAACGAGCCCTGA607890.1013767181460073No Hit
CTGTCGTTGACCTAGT607860.10137171510015297No Hit
GGTTCACCTTTCTGAG607850.10137004741820152No Hit
GTAAAGCCTTTGACCA607710.1013466998708814No Hit
CGTGCAGACCACCTAA607040.101234965180135No Hit
CACGATTGATACAGAA604510.100813041646421No Hit
CTATGTTACAATGCTC603940.100717983775189No Hit
TGTACCAGAGAATAAC601510.10031273706098941No Hit
AGGTGTGGAAGGGAGG600090.1000759262238851No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)