FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160764238
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTGCC4406753327.41127849590529No Hit
CAGTAATT3863395024.031432911093077No Hit
ATTACCGG3862781224.027614897785913No Hit
GCCGGTAA3716282523.116350665002997No Hit
CAGTAATA2528810.15729928692225692No Hit
TGACTGCA1983280.12336574506078896No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)