FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161932512
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTGCC4443105827.438009483852138No Hit
ATTACCGG3895017324.053337108733295No Hit
CAGTAATT3894118824.047788500928093No Hit
GCCGGTAA3740944423.101873452071196No Hit
CAGTAATA2542750.1570252921167554No Hit
TGACTGCA1942730.11997158421157574No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)