FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161932512
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGAAACCTCGTTCTC5099190.31489599815508323No Hit
GGGGGGGGGGGGGGGG4783050.2953730502247751No Hit
ATGATGCACAACCAAA4450430.2748323943742687No Hit
CTCAATTTGAGCCTAT4106240.2535772433394969No Hit
CGTGTACCTAGCCCTG3987170.2462241801078217No Hit
TACGTGAACATGTGGG3753400.23178791915486374No Hit
AGTCCTGCTCATGCGC3730390.23036695682211117No Hit
CGAGTTAACATAGCAA3648850.22533152576549917No Hit
CTACCTCGAAGGCATG3646120.2251629370141556No Hit
CAATCAGACGTGGTGA3322730.20519227170390586No Hit
TCGTAATCTCGGTTGC3294120.20342548629147433No Hit
TATCACTACATCCTTT3214670.19851912134852823No Hit
CCGTTTGTGTCCAGCG3171420.1958482555992215No Hit
AACAGCTACCCAAACT3123940.19291616991651436No Hit
TGGACGCACCGGTACC3017000.1863121841770725No Hit
CGTTCTCGATAGCGAG2870960.1772936122920146No Hit
AGGAACCGACCAGCAC2812960.17371187325248189No Hit
CCTAACGCTAAATCGA2783600.17189877224902186No Hit
TTGTCAACTAGCCCTG2737310.16904017397074653No Hit
AGTTTCTTGAATGCGG2737100.16902720560525855No Hit
TCGACTCACCTCGAGC2730880.16864309497032937No Hit
TATGTACCTCCAACGC2564130.15834559523167283No Hit
TTTGACGGATGCTCAA2550010.1574736270379107No Hit
CGTGTAATGACGTAAA2542690.15702158686947312No Hit
CGTGTCTTGTAATAGG2524650.15590754251993572No Hit
TCTACTAACGATTAAG2499580.15435936669715838No Hit
GTTCCTGTGGCCCAAC2487620.1536207874055582No Hit
AGGTATAGAAGTTGAA2454850.1515971048482222No Hit
CTAGTGCCTCGACAAG2450160.15130747801899103No Hit
GCTTACCACAATGCTC2431530.15015699873784455No Hit
CACATCCTGTCATGTG2362770.14591078535235716No Hit
CGCAATCCTCCTGTGG2340710.1445484894349073No Hit
CACTTTATGATCTGTG2310850.14270451137076168No Hit
TGCGACGACGCGCTGT2201730.13596590164673045No Hit
CGATACAACACGTGCC2176730.13442204861244914No Hit
CTTAGGCCTGCACGCT2174990.13431459644126315No Hit
GTGTAACTGCCTGTGG2174320.1342732211799444No Hit
TCAGGAGGATGCTACA2166420.13378536362111149No Hit
AACAGCTACTCTGTAG2142030.1322791806008666No Hit
TCGACTCACTCGCAGC2126570.13132446188446703No Hit
CGATACCCTTCAATGC2106490.13008443912733225No Hit
CACCCATACCCACAAT2046050.1263520200316537No Hit
GTTTGAGACACAACAA2034970.12566778436686019No Hit
GTCTCGTACAACCCGC2004190.12376699251105298No Hit
TCCCACATGACGAGCA1998810.12343475533807566No Hit
GGCAGTAGAAGCCCTG1982800.12244607185492187No Hit
AGGCGATGACGAATCT1979240.12222622718284022No Hit
TTTGCGGCTAGTCTGT1959840.1210281972282379No Hit
GGTTGAACTCCCGAGT1957410.12087813471330575No Hit
GAAGCAGTGGAAATCA1947950.12029394072513369No Hit
AGCTCTGCTAGGACCA1934940.11949051960609368No Hit
CCCTGAACTTCGAGAG1929540.11915704735068891No Hit
TCCGTAAGACGATCGC1927900.11905577059164005No Hit
GTTTGAGACTGAGGCA1925070.11888100642815941No Hit
ACCTCCAACATCATGC1899160.11728095714343022No Hit
GAGATCACTGCTGAGA1892650.11687893781330336No Hit
AGCCAATTGAATCTGC1891370.11679989253794816No Hit
GTTCTCGACTAACGAA1859410.11482623081892289No Hit
CCCTTGCCTATCCTCC1838960.11356335903688075No Hit
CTTGCTGACCCGATTA1836580.11341638422801717No Hit
CATATCACTAATCCGT1827970.11288468124301067No Hit
GCCGAACTGTGATGAA1825850.11275376250570361No Hit
GAGAGAAGATAACCCA1820000.11239250089568177No Hit
TGTTATCACTGAGTAA1818120.11227640314750381No Hit
CGCACACGATAACGAA1810040.1117774298468241No Hit
GCATCTCTGGAACCTT1809520.11174531770371104No Hit
AGATATGGAACCTGCG1801780.11126734080429752No Hit
CAAAGACCTTGTGCTA1783180.11011871414679222No Hit
TATTCAGCTTGCTCAA1782560.11008042659154205No Hit
AAACAACGATGGAACG1779800.10990998521655738No Hit
CCCGAGTGACAGATTC1770970.1093646963248492No Hit
GTTATCACTCAGGCCT1753320.10827473608264657No Hit
TTGATTCACCGAAGCA1742610.10761334944276045No Hit
TGCCGTTACCATCCTC1739160.10740029772402962No Hit
CCCTTGCCTCGGTACC1738720.10737312591062628No Hit
GTTTCCCGACTGTGCG1716060.10597377752035367No Hit
AATCTCTTGTCGTACA1713500.10581568696964325No Hit
CCTACGTTGAGCCCTG1705030.10529262956162873No Hit
GCAACTTGAAGGTGCA1697100.10480291937915469No Hit
GGAGTTACTGGTGTCC1696620.1047732774008965No Hit
GTGTTGTGAGCTAGAG1690880.1044188087442255No Hit
GTTAATCCTAAACTGA1681110.10381547097842836No Hit
CGTATCGCTAAATGCA1677420.10358759827056843No Hit
GTTTCAGGAGCGGTAA1662980.10269586875796752No Hit
CTCAATTTGGGCAGTA1660410.10253716066604339No Hit
ACCTCCAACAGATTCC1660410.10253716066604339No Hit
CCTTCTTTGACAACAA1659770.1024976380283658No Hit
CGTTACCTGCTCATTT1658870.10244205931913167No Hit
CCCGACAGACAGACCC1654930.10219874808092894No Hit
ACTGTGATGAGTGGTG1647250.10172447642879769No Hit
CGATCAAACAATCCAC1646730.10169236428568464No Hit
CGACCTTACACAGGCA1639090.10122056279840827No Hit
TACTGTACTATCTGTG1636660.10107050028347613No Hit
GGACACAGATGGGCCT1632750.10082904166891452No Hit
CCCACCTCTGGATGGT1631180.10073208769836164No Hit
ATGGACTACCATCTTT1625090.10035600509921072No Hit
TACCTGCTGAGGGCTA1622970.10022508636190366No Hit
TTCTATGACGCCCTGA1622830.10021644078491167No Hit
TAGGGTTTGAACCCGC1622700.10020841274913342No Hit
ACGTAGGGAATTAAGG1620780.10008984483610062No Hit
CTGGGACACATCCTCC1620770.1000892272948869No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)