FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167734983
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG4793050.28575136291038344No Hit
TCGCCTCCTACTCGAT3396550.20249502752803808No Hit
CGAGGACCTCGTTCTC3113390.18561363552885088No Hit
GGAGTTACTATTGCCA2827250.16855458231989684No Hit
CAAGAAATGATCACAC2766120.1649101428054516No Hit
GGCTTAAACAATCCTG2741660.1634518900568285No Hit
TCAGCGCGATGCCACG2637460.15723970950055183No Hit
GTCTGGCGATGAGCAG2636770.15719857318016958No Hit
CTGTCGTTGCAGCTGC2561210.15269384800903457No Hit
CGCTTCAACGAGCTGA2437310.14530719569691675No Hit
GTTATCACTGAGCTGA2304690.13740067568373618No Hit
CGCTTGTACAGGTCCC2287330.1363657097100609No Hit
ATTCAGGTGGCTCAGC2118380.1262932730019712No Hit
CATGTTACTACCAGTT2077690.12386742245653072No Hit
CAAGAATGATTCTGGA2005910.11958805277966374No Hit
TTGCGGTCTAAAGTAC1953680.11647421218029395No Hit
CCATGCTACTCGAGAG1952730.11641757521744882No Hit
ACGGTTAACAAGTTAG1947120.11608311904738441No Hit
CAATTCGGATAATCGC1879480.11205056729281095No Hit
TCAGGCTCTTAGCTTG1878510.11199273797285328No Hit
TGATATCCTGAATTGA1854240.1105458126167992No Hit
AGCAACTTGTGGGCCT1834920.10939399564609607No Hit
GAACAAATGACCATGT1799320.10727159998579426No Hit
CTAGTGCCTGTCTTGA1752290.10446777223568206No Hit
TTCTAGACTAGCGCTC1749860.10432290084650976No Hit
CTAATCTTGGCTGGCT1734590.10341253619109378No Hit
GATTCTGGATCGACAT1730580.10317346859003168No Hit
GCAATCATGTCGTCCT1729350.10310013862761115No Hit
GGTATTTCTATAGGTA1707340.10178794962527285No Hit
CCAACGGTGAACGTTC1695330.10107193917919911No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)