FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69088910
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGACTTC1786545625.858645041584822No Hit
AGTCTCAG1728974425.025353562532683No Hit
GCCGAAGT1695586924.54209944837746No Hit
CAATGGCA1593280223.0613017342436No Hit
TTGACTTA1104810.15991133743461866No Hit
CGTCTCAG713030.10320469667273661No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)