FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132557570
Sequences flagged as poor quality0
Sequence length90
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4157860.31366447046366347No Hit
ATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAA1664110.1255386621827784No Hit
GAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCTGGAGTGACTATAT1526130.11512959991647402No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1491090.11248622013816337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)