FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71791099
Sequences flagged as poor quality0
Sequence length10
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTTACGTG7074803298.54708032816157No Hit
ACTTTACGTA2042820.2845505958893316No Hit
ACTTTAAGTG1245350.1734685799976401No Hit
AATTTACGTG1086080.15128337845893683No Hit
ACTTTCCGTG1011470.14089072518586182No Hit
ACATTACGTG784820.10931995901051744No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)