FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71742171
Sequences flagged as poor quality0
Sequence length10
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTTACGTG7073178598.59164284281277No Hit
ACTTTACGTA2045420.2851070676408719No Hit
ACTTTAAGTG1039050.14483113425714425No Hit
AATTTACGTG989200.1378826408807729No Hit
ACTTTCCGTG979550.13653754637561777No Hit
ACATTACGTG830870.11581333383401515No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)