FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006206689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006206689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108874026
Sequences flagged as poor quality0
Sequence length10
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCACGTTCG10743565398.6788648745294No Hit
TTCACGTTCG1839250.16893377305621085No Hit
GTCCCGTTCG1785430.1639904452509178No Hit
GTCAAGTTCG1364070.12528883610862337No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)