FastQCFastQC Report
Thu 23 Jun 2022
EGAF00006207026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006207026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences247923
Sequences flagged as poor quality0
Sequence length101
%GC60

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40521.6343784158791237No Hit
ATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5200.20974254103088458No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)